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Browse Pathways
Browse Processes
Browse Organisms
Browse Molecular Entities
Browse Basic Molecules
Browse Proteins
Browse Genes
Search Database
Keyword Search
Built-in Queries
Advanced Query Interface
PathCase Tools
Ontology Viewer
BiopaxViz: Biopax Visualizer
Web Resources
Help With the Site
PathCase Tool
BiopaxViz
What is it?
BiopaxViz visualizes your own homemade pathways or pathways from other data sources, which are stored in Biopax formatted files.
How to use?
In the graph viewer window below, single-click on the first button that has floppy disk image on it. In the upcoming menu, click on the menu item 'Visualize Graph from Biopax File', and locate the Biopax file that you want to visualize from the file selection window. Depending on your connection speed and the size of the Biopax file that you upload, it may take a while for the graph to appear.
BiopaxViz
Graph Help
Note: If you cannot view the applet below, click
here
to obtain the latest version of Java plug-in.
It may take a moment for the applet to load at the first time you use the PathCase visualization.
Your browser does not have the Java plug-in installed, or your security settings are set to not allow Java applets to run. Please modify your security settings and/or
download the latest version of Java
.
BiopaxViz
