PathCase in Literature

GoogleScholar reports over 50 works citing PathCase. Here is an incomplete list of citing literature for PathCase. Please refer to the (Elliott et al., Bioinformatics 2008) paper to cite PathCase.

An overview of data models for the analysis of biochemical pathways
Y Deville, D Gilbert, J Van Helden, SJ Wodak - Briefings in Bioinformatics, 2003 - Oxford Univ Press

Visualizing biological pathways: requirements analysis, systems evaluation and research agenda
P Saraiya, C North, K Duca - Information Visualization, 2005 - staging-www.palgrave-journals.com

Evolution of web services in bioinformatics
PBT Neerincx, JAM Leunissen - Briefings in bioinformatics, 2005 - Oxford Univ Press

PathSys: integrating molecular interaction graphs for systems biology
M Baitaluk, X Qian, S Godbole, A Raval, A Ray, A … - BMC bioinformatics, 2006 - biomedcentral.com

BiologicalNetworks: visualization and analysis tool for systems biology
M Baitaluk, M Sedova, A Ray, A Gupta - Nucleic acids research, 2006 - Oxford Univ Press

Understanding platelets
M Dittrich, I Birschmann, C Stuhlfelder, A … - Thromb Haemost, 2005 - schattauer.de

VitaPad: visualization tools for the analysis of pathway data
M Holford, N Li, P Nadkarni, H Zhao - Bioinformatics, 2005 - Oxford Univ Press

Detecting conserved interaction patterns in biological networks
M Koyuturk, Y Kim, S Subramaniam, W Szpankowski, A … - Journal of Computational Biology, 2006

Aspects of ontology integration
CM Keet - 2004 - meteck.org

Biological data and conceptual modelling methods
CM Keet - Journal of Conceptual Modeling, 2003

Pathway databases
CF Schaefer - Annals of the New York Academy of Sciences, 2004

The pathways and networks of nuclear receptors and modeling of syndrome X
T Kaminuma - Chem-Bio Informatics Journal, 2003 - cbi.or.jp

Graphs in molecular biology
W Huber, V Carey, L Long, S Falcon, R Gentleman - BMC bioinformatics, 2007 - biomedcentral.com

Exploring photosynthesis evolution by comparative analysis of metabolic networks between
Z Wang, XG Zhu, Y Chen, Y Li, J Hou, Y Li, L Liu - BMC genomics, 2006 - biomedcentral.com

Integration of structural and functional genomics.
CK Tuggle, JCM Dekkers, JM Reecy - Animal Genetics, 2006 - pt.wkhealth.com

Conceptual modelling for applied bioscience: The bacteriocin database
CM Keet - CSPS: Computational intelligence, 2003 - meteck.org

The integrated microbial genomes (IMG) system: a case study in biological data management
VM Markowitz, F Korzeniewski, K Palaniappan, E … - VLDB’2005

Pharmacogenomic strategies against resistance development in microbial infections
W Ziebuhr, K Xiao, B Coulibaly, R Schwarz, T … - pgs, 2004 - Future Medicine

Subgraph centrality and clustering in complex hyper-networks
E Estrada, JA Rodríguez-Velázquez - Physica A: Statistical Mechanics and its Applications, 2006 - Elsevier

Identifying targets for drug discovery using bioinformatics
YP Phoebe Chen, F Chen - Expert Opin. Ther. Targets, 2008 - Informa Pharma Science

Directed hypergraph planarity
ALP Guedes, L Markenzon - Pesquisa Operacional, 2005 - SciELO Brasil

SPDBS: An SBML-Based Biochemical Pathway Database System
T Jung, K Kim, S Jung, T Kim, M Ahn, J Lee, W Cho - LECTURE NOTES IN COMPUTER SCIENCE, 2006 - Springer

HBVPathDB: A database of HBV infection-related molecular interaction network
Y Zhang, XC Bo, J Yang, SQ Wang - World J Gastroenterol, 2005 - wjg.wjgnet.com

Metabolic pathway alignment between species using a com-prehensive and flexible similarity measure
Y Li, D de Ridder, MJL de Groot, MJT Reinders - BMC Systems Biology, 2008 - biomedcentral.com

Data Mining Applications in the Post-Genomic Era EG Giannopoulou, S Kossida - journals.i-techonline.com

Engineering Approaches Toward Biological Information Integration at the Systems Level
WJ Zheng - ingentaconnect.com

Biological Pathways Databases
A Scharlott - 2005

Instance Relation Discovery for Integration of Pathway Databases
C Chen - 2006

Integration of Data in Pathogenomics: Three Layers of cellular complexity and an XML-based Framework
M Dünßer, R Lampidis, S Schmidt, D Seipel, T
Journal of Integrative Bioinformatics 2004

Subgraph centrality and clustering in complex hyper-networks
A Physica - Physica A, 2006

An Efficient Algorithm for Detecting Closed Frequent Subgraphs in Biological Networks
P Jia-yang, Y Lu-ming, W Jian-xin, L Zheng, L Ming - BioMedical Engineering and Informatics, 2008. BMEI 2008. …, 2008 - ieeexplore.ieee.org

Genomics and Bioinformatics
JE STENGER, SG GREGORY - Genetic Analysis of Complex Diseases, 2006 - doi.wiley.com

VIP: Visualization of Integrated Proteomics Data
EG Giannopoulou, G Lepouras, ES Manolakos - 8th IEEE International Conference on BioInformatics and …, 2008 - pelopas.uop.gr

HBVPathDB: A database of HBV infection-related molecular interaction network
YZX ChenBo JingYang Sheng-QiWang, 2005

Mining Biological Networks for Frequent Interaction Patterns
M Koyuturk, A Grama, W Szpankowski - cs.purdue.edu

Bioinformatics: Data Mining Among Genome Sequences
P Strategies - Pathogenomics: Genome Analysis of Pathogenic Microbes, 2007 - books.google.com

Complex Networks as Hypergraphs
E Estrada, JA Rodriguez-Velazquez - Arxiv preprint physics/0505137, 2005 - arxiv.org

P at M an: A Visual Database System to Manipulate Path Patterns and Data in Hierarchical Catalogs
A Koukoutsaki, T Dalamagas, T Sellis, P Bouros - Sigma - dblab.ntua.gr

Finding Frequent Subgraphs in Biological Networks Via Maximal Item Sets
H Zantema, S Wagemans, D Bosnacki - Springer


Last update: March, 2009